PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro03_G05259
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family G2-like
Protein Properties Length: 377aa    MW: 43775.8 Da    PI: 7.142
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro03_G05259genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.73.4e-30102155255
      G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  prlrWtp+LH +F++ave LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+
  Ro03_G05259 102 PRLRWTPQLHLSFLHAVELLGGQERATPKLVLQLMNVRGLSISHVKSHLQMYRS 155
                  8****************************************************7 PP

2Myb_DNA-binding45.61.6e-14103154148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+rWT+++++ +++av++lGg    t+k++ + m+  g++  ++ks++q+y+
      Ro03_G05259 103 RLRWTPQLHLSFLHAVELLGGQeraTPKLVLQLMNvRGLSISHVKSHLQMYR 154
                      89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MRNELEFGDH LEEKSDEISE EQAENLSCGS SQKWSSFDLN EEASDNCNNT INLADHHERR  60
TVETDERRTL LAQGNFINNN AANNISNSSR AKVRPYVRSQ LPRLRWTPQL HLSFLHAVEL  120
LGGQERATPK LVLQLMNVRG LSISHVKSHL QMYRSKKLDG NGQVVPHKKC EHGRDHISNF  180
FSRSSSLPNK EVVQGNDLYK PMDPANIAMN PRLLLGEKRL PPLQRNSKHW RARRFASNII  240
NCSDNHNGSS QSDIMQRMMC TCRPSTRQTD EHCWNLEGLS NSRCYEQFQP PFRLEYWNKE  300
KILKYKEWMP DLELSLQSQR VVGNEINDET HDQISHEEEH YETAQGVKQT SQHYKDHQFE  360
DMNSKQEIIS TKLSLSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.18e-36G2-like family protein