PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ro02_G35662 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 194aa MW: 22224 Da PI: 7.0046 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 76.3 | 3.6e-24 | 36 | 96 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dD+y+WrKYGqKe+ g+++pr YYr t++ gC+++k+v r +ed+++++i+Y g+H+++ Ro02_G35662 36 DDEYSWRKYGQKEILGAKYPRDYYRYTHRntqGCSARKQVRRMDEDQTILTIMYCGNHTCR 96 8***************************98889**************************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 194 aa Download sequence |
MKKKSVNWTL RCRETLAIRT EQVRVGSKIG IGGPPDDEYS WRKYGQKEIL GAKYPRDYYR 60 YTHRNTQGCS ARKQVRRMDE DQTILTIMYC GNHTCRHVSK LVPPPSPQQQ EEMNVVDNFW 120 GTSCSSSRAS TSPPVGKSTQ TERRSTFDLT GMDPVPDMDL SIDPFLDMDL LMHLRGLDQF 180 HNTDLGEVDT VEDC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G11070.2 | 2e-30 | WRKY family protein |