PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro02_G22773 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | ERF | ||||||||
Protein Properties | Length: 149aa MW: 16548.2 Da PI: 5.0871 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.7 | 3.9e-20 | 20 | 73 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrd + g+ +r +lg+f taeeAa+a+++a+ +++g+ Ro02_G22773 20 KYRGVRRRP-WGKFAAEIRDSTRHGQGARLWLGTFNTAEEAARAYDRAAFSMRGA 73 8********.**********5445566*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence |
MEEDSSRGGK TKQEEQKEVK YRGVRRRPWG KFAAEIRDST RHGQGARLWL GTFNTAEEAA 60 RAYDRAAFSM RGALAILNFP SEHGLPDSSA AAAISSPSSS SSSPTSFSES SSTTRTQPGR 120 EVFEFECLDD KVLEDLLDFD KKNEMFEAQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 5e-29 | ERF family protein |