PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro02_G22772 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | ERF | ||||||||
Protein Properties | Length: 177aa MW: 19928 Da PI: 5.3524 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.3 | 4.4e-19 | 16 | 67 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+G r+++ +gr++AeIrdp+ ng +r +lg+f+taeeAa+a+++a+ +++g Ro02_G22772 16 TRYRGTRRRP-WGRYAAEIRDPTRNG--ARLWLGTFDTAEEAARAYDRAAFRFRG 67 58********.**********98887..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MEGKRAENQP KARDQTRYRG TRRRPWGRYA AEIRDPTRNG ARLWLGTFDT AEEAARAYDR 60 AAFRFRGNLA ILNFPNEYQY HNSSTSTFVS PNSDSSSFAL TSAAAADTGK HNGKEESEVI 120 ELEYLDNMIL EELLATKQDA DGNYMEIKAN TIPGFVLTLK LNYDQQDFAA LSGQTSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 2e-20 | ERF family protein |