PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro02_G22770 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | ERF | ||||||||
Protein Properties | Length: 186aa MW: 21190.1 Da PI: 8.9158 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.8 | 6.4e-19 | 63 | 113 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + +g r++lg+f++ae Aa a+++a+ +l+g Ro02_G22770 63 SYRGVRRRP-WGKYAAEIRDSTRRG--VRVWLGTFDSAEAAALAYDQAAFALRG 113 69*******.**********43343..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MLDFPPFSTN ESQDVLLFDA LAKEPALVTE ETNWFGGVVK EEEVTSNSNA FQVFEEKPRK 60 EKSYRGVRRR PWGKYAAEIR DSTRRGVRVW LGTFDSAEAA ALAYDQAAFA LRGPLAVLNF 120 PVEVVRESLQ DIKCRYDEGC SPVVALKRRH SMRRKSACKK ISCNKEHEKV KSLISSNFDL 180 WIKDPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 1e-43 | ERF family protein |