PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro02_G21636

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

bZIP

Protein Properties

Length: 597aa MW: 65854.5 Da PI: 6.6

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro02_G21636	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.1	5.1e-10	424	479	5	60
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 kr++r NR +A rs +RK +i eLe kv++L++e ++L +l l+ + l Ro02_G21636 424 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLN 479 9*******************************************999987765555 PP

Sequence ? help Back to Top
Protein Sequence Length: 597 aa Download sequence
MGDTEEANSD MMQRLQSSFG TSSSSILKQP LSMDQLNIPQ FNTSQIRSRH FAQSFTGDSS 60 KRLGIPPSHP NHIPPLSPYS QIPVARPVNQ TMGSQNFSPG PTHSRSLSQP AFFSLDSLPP 120 LSPSPYRESP STSMSESVSV DVSMEDRDAS SQSLLPPSPF TRGNFSRVGE TLPPRKAHRR 180 SNSDIPFGFC SMMQQSLPPI APMRGSGSLD LSMSGTENSG MVKPAQLVKK ESSWERTGDN 240 NAEGTGERKS EGDVADDLFS AYMNLDSIDA LNSSGTDDKN GNDNREDMDS SRASGSKTNC 300 DSSDNEVESS VNESGGMQRP GLNSLTDMRE GIKRSAGGDI APTTRHFRSV SMDSFMGKLQ 360 FGDESPKLLP SPGTRPGQLS PSNSIDTNSN AFSLEFGNGE FSGAEMKKIM ANEKLAEIAL 420 TDPKRAKRIL ANRQSAARSK ERKMRYISEL EHKVQTLQTE ATTLSAQLTL LQRDSVGLNN 480 QNNELKFRLQ AMEQQAQLRD ALNEALTSEV QRLKLATTDL NGESRPSKGM INPQRFQLQQ 540 QSPQTQFNMQ QHQQQHQQQQ QQQHQQQQQQ QQQHQQQQTP QQLQQNGSTT SKPESNQ

Sequence ? help Back to Top

Protein Sequence Length: 597 aa Download sequence

MGDTEEANSD MMQRLQSSFG TSSSSILKQP LSMDQLNIPQ FNTSQIRSRH FAQSFTGDSS  60
KRLGIPPSHP NHIPPLSPYS QIPVARPVNQ TMGSQNFSPG PTHSRSLSQP AFFSLDSLPP  120
LSPSPYRESP STSMSESVSV DVSMEDRDAS SQSLLPPSPF TRGNFSRVGE TLPPRKAHRR  180
SNSDIPFGFC SMMQQSLPPI APMRGSGSLD LSMSGTENSG MVKPAQLVKK ESSWERTGDN  240
NAEGTGERKS EGDVADDLFS AYMNLDSIDA LNSSGTDDKN GNDNREDMDS SRASGSKTNC  300
DSSDNEVESS VNESGGMQRP GLNSLTDMRE GIKRSAGGDI APTTRHFRSV SMDSFMGKLQ  360
FGDESPKLLP SPGTRPGQLS PSNSIDTNSN AFSLEFGNGE FSGAEMKKIM ANEKLAEIAL  420
TDPKRAKRIL ANRQSAARSK ERKMRYISEL EHKVQTLQTE ATTLSAQLTL LQRDSVGLNN  480
QNNELKFRLQ AMEQQAQLRD ALNEALTSEV QRLKLATTDL NGESRPSKGM INPQRFQLQQ  540
QSPQTQFNMQ QHQQQHQQQQ QQQHQQQQQQ QQQHQQQQTP QQLQQNGSTT SKPESNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-163	bZIP family protein