PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro02_G13736 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | G2-like | ||||||||
Protein Properties | Length: 498aa MW: 54867.1 Da PI: 4.966 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 109.5 | 1.7e-34 | 271 | 325 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+ Ro02_G13736 271 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 325 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 56.9 | 4.7e-18 | 273 | 324 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + m +g+t +++ks++qky+ Ro02_G13736 273 RMRWTPELHEAFVEAVNQLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 324 89******************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 498 aa Download sequence |
MEARPAIRRS AAMGVSGALS SSLPVLQSPS EETYPKLPDS QQVSMEREHM SRPSVHAGHL 60 TSNSGVVGHI FSSPSRFSTD LHYSSVSPHE KQSRNNPFIS QSSSSVSMPL PHSSPSGVFQ 120 STASCAYSKE NSDSWGTDSL PGFLDFPVNT PVENSQIERS SCSGIMAVEE ISKQNDWQEW 180 ANQLITDDDA LTSNWSDLLV DNNVTDMEPK MTYQVPKPSL NFSAQQSQVP QQHPASSREI 240 IPAPSREILP VPSNDIIAVS TPSSANSAAA KPRMRWTPEL HEAFVEAVNQ LGGSERATPK 300 GVLKLMKVEG LTIYHVKSHL QKYRTARYRP ESSEGSSEKK LTPLEEMTSL DLKTGIEITE 360 ALRLQMEVQK RLHEQLEIQR NLQLRIEEQG KYLQMMFEKQ CKSGVDKLNA SSSSLDDPSA 420 QPSDAMEISP DKSELEPSKV DHGETEADPV KSNVTSAECA EEQPIEKQKS PETEACQDPE 480 PDVCMSSSPP PKRPKIKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28610.1 | 1e-113 | G2-like family protein |