PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro02_G13736
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family G2-like
Protein Properties Length: 498aa    MW: 54867.1 Da    PI: 4.966
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro02_G13736genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like109.51.7e-34271325155
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+
  Ro02_G13736 271 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 325
                  79****************************************************8 PP

2Myb_DNA-binding56.94.7e-18273324148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+rWT+e++e +v+av+qlGg    t+k + + m  +g+t +++ks++qky+
      Ro02_G13736 273 RMRWTPELHEAFVEAVNQLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 324
                      89******************99*****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 498 aa     Download sequence    
MEARPAIRRS AAMGVSGALS SSLPVLQSPS EETYPKLPDS QQVSMEREHM SRPSVHAGHL  60
TSNSGVVGHI FSSPSRFSTD LHYSSVSPHE KQSRNNPFIS QSSSSVSMPL PHSSPSGVFQ  120
STASCAYSKE NSDSWGTDSL PGFLDFPVNT PVENSQIERS SCSGIMAVEE ISKQNDWQEW  180
ANQLITDDDA LTSNWSDLLV DNNVTDMEPK MTYQVPKPSL NFSAQQSQVP QQHPASSREI  240
IPAPSREILP VPSNDIIAVS TPSSANSAAA KPRMRWTPEL HEAFVEAVNQ LGGSERATPK  300
GVLKLMKVEG LTIYHVKSHL QKYRTARYRP ESSEGSSEKK LTPLEEMTSL DLKTGIEITE  360
ALRLQMEVQK RLHEQLEIQR NLQLRIEEQG KYLQMMFEKQ CKSGVDKLNA SSSSLDDPSA  420
QPSDAMEISP DKSELEPSKV DHGETEADPV KSNVTSAECA EEQPIEKQKS PETEACQDPE  480
PDVCMSSSPP PKRPKIKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.11e-113G2-like family protein