PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro02_G07057 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | NF-YB | ||||||||
Protein Properties | Length: 183aa MW: 20717 Da PI: 6.5151 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 174.5 | 1.1e-54 | 36 | 131 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdr+lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++wal+tlGf+dy eplk yl+++relegek Ro02_G07057 36 KEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALSTLGFDDYSEPLKRYLHRFRELEGEK 131 89********************************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MVDNIGNNNN NISSDPREGF NYNFTGDGHH HDEVIKEQDR LLPIANVGRI MKQILPPNAK 60 ISKEAKETMQ ECVSEFISFV TGEASDKCHK EKRKTVNGDD ICWALSTLGF DDYSEPLKRY 120 LHRFRELEGE KAQHSKANSG GEDQRNEVVE VSPTRATVTS SSTPFMKFNV INERGNSSIP 180 RRF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 7e-63 | NF-YB family protein |