PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro02_G03986
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family WRKY
Protein Properties Length: 271aa    MW: 30043.1 Da    PI: 10.1016
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro02_G03986genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.91.6e-31205262359
                  -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ e+p+++++tYegeHnh+
  Ro02_G03986 205 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHP 262
                  99***********************9988****************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MGALYSYGSG GGFNMEEVEE ANKAAVASCH RVLSLLSQPQ DQVQFRNLKA ETGEAVFRFK  60
KVVSLLNTGL GHARVRKLKK LQIPFPESVL LDNPNCTTDH SSKTPHFLQS RFAENPTQDL  120
SLNVRNSLNG SVANLDGNSF HLIGAPISSD QNSQHKRKCS VRGDDGSAKC GSSGRCHCSK  180
KRKHRVKRSI KVPAISNKLA DIPPDDYSWR KYGQKPIKGS PHPRGYYKCS SMRGCPARKH  240
VERCLEEPSM LIVTYEGEHN HPRMPSQSTT T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.12e-82WRKY family protein