PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro02_G03986 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | WRKY | ||||||||
Protein Properties | Length: 271aa MW: 30043.1 Da PI: 10.1016 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.9 | 1.6e-31 | 205 | 262 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ e+p+++++tYegeHnh+ Ro02_G03986 205 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHP 262 99***********************9988****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MGALYSYGSG GGFNMEEVEE ANKAAVASCH RVLSLLSQPQ DQVQFRNLKA ETGEAVFRFK 60 KVVSLLNTGL GHARVRKLKK LQIPFPESVL LDNPNCTTDH SSKTPHFLQS RFAENPTQDL 120 SLNVRNSLNG SVANLDGNSF HLIGAPISSD QNSQHKRKCS VRGDDGSAKC GSSGRCHCSK 180 KRKHRVKRSI KVPAISNKLA DIPPDDYSWR KYGQKPIKGS PHPRGYYKCS SMRGCPARKH 240 VERCLEEPSM LIVTYEGEHN HPRMPSQSTT T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30590.1 | 2e-82 | WRKY family protein |