PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro02_G02461
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family ARR-B
Protein Properties Length: 614aa    MW: 67844.6 Da    PI: 6.4638
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro02_G02461genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like841.6e-26201254155
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  kpr++W+ +LH++Fv av++L G++kA+Pk+il+lm+ + Lt+e+v+SHLQk+Rl
  Ro02_G02461 201 KPRVVWSVDLHRKFVAAVNKL-GIDKAVPKKILDLMNEEKLTRENVASHLQKFRL 254
                  79*******************.********************************8 PP

2Myb_DNA-binding35.32.6e-11203253148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ +++ ++v av++lG +   +k+I   m+ +++t++++ s++qk++
      Ro02_G02461 203 RVVWSVDLHRKFVAAVNKLGIDkaVPKKILDLMNeEKLTRENVASHLQKFR 253
                      678********************************99************97 PP

3Response_reg75.51.9e-25201281109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl vdD+ + +++l+++l k +y +v++++++  al+ll+e++  +Dl++ D++mp+mdG++ll+     e++lp+i+++++g+ e++ + +  Ga 
   Ro02_G02461  20 VLAVDDDVTCLRVLETMLLKCQY-HVTATSHAFTALKLLRENKnkYDLVISDVQMPDMDGFKLLELVGL-EMDLPVIMLSSNGDTELVMKGVTHGAC 114
                   799********************.***************888888*******************87754.558************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   d+l+Kp+ ++el +
   Ro02_G02461 115 DYLVKPVRIQELKN 128
                   ***********986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 614 aa     Download sequence    
MTIEPVLDDQ RDQFPIGMRV LAVDDDVTCL RVLETMLLKC QYHVTATSHA FTALKLLREN  60
KNKYDLVISD VQMPDMDGFK LLELVGLEMD LPVIMLSSNG DTELVMKGVT HGACDYLVKP  120
VRIQELKNIW QHVVRRKKVD SKDQANSGNQ DKSHIGSCGG GVGNLDQNVK LNKKRKDQKE  180
DEDDNRDEDG YDNEDPSTQK KPRVVWSVDL HRKFVAAVNK LGIDKAVPKK ILDLMNEEKL  240
TRENVASHLQ KFRLYLKRIS CVANQQANMM AAIGSSDSSY LQMGSFNGVG NYHALTGPGQ  300
FNNTGFRSIP LNGVIGRVNT PPGLGLHCLP SSGSNKLGHG QKNISNSILD QGIFPGNHRN  360
GSMLQANLEL DQRHSKPVGD LSAANNGSPV FPISSGLPDA KLRSSDGVGL TDNPILRHPR  420
DFEVSVAPLK SEIPSPFLDH GRLNDSWSSI AQSSAFRSSN NMPVVMRSCQ FDVPCSQLQD  480
PRPEMPISAD SDPFQGWVWV DHKQDSPYPS DAICSSMDSL MPANVPVAFD HNLDSKGTTL  540
QRNVDFNSIG QSNFRYPVHI KFDEVERSME EASMNLKAGY VMDQRKPQGG LVSNNYGSLD  600
DLVSAMTNQF ANLA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135176RRKKVDSKDQANSGNQDKSHIGSCGGGVGNLDQNVKLNKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-122ARR-B family protein