PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro02_G02435

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

G2-like

Protein Properties

Length: 339aa MW: 37215.4 Da PI: 8.025

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro02_G02435	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101	7.7e-32	145	198	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH++Fv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Ro02_G02435 145 PRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 198 9****************************************************7 PP
2	Myb_DNA-binding	47.5	4.3e-15	146	197	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ +v+av++lGg+ t+k++ + m+ k +tl ++ks++q+y+ Ro02_G02435 146 RMRWTTTLHAHFVHAVQLLGGHeraTPKSVLELMNvKDLTLAHVKSHLQMYR 197 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MMYPSSNSNP IIRTASPPLP DLSLQISPPS SATDHYEIGF ASKALNCDRS STTESGSSGS 60 DLSHENVLYH LDQRTNYNLA SAKPEPNLSL GLEMKDIMNR SSTSPTPLHQ VLPRNFNHHH 120 PQIYGREFKR SARVVGNVKR SVRAPRMRWT TTLHAHFVHA VQLLGGHERA TPKSVLELMN 180 VKDLTLAHVK SHLQMYRTVK STDHKGTGHE GQIDMGLDQN PGNNIVQGNG SVPSCDSEKA 240 INSPPTLLLQ NPNCRGSWHS TRETNGSCKL SHGNSLTYSH SPSSNGSKVE EEDSGSGSGR 300 QLDCSSLSSS DHMYLNLEFT LGRPSGEWTM LNTLNLQMT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.1	7e-60	G2-like family protein