PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro02_G02317 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | TALE | ||||||||
Protein Properties | Length: 1038aa MW: 115750 Da PI: 6.1241 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 26.1 | 1.4e-08 | 424 | 456 | 22 | 54 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp+ +e+ LA+++gLt +qV +WF N R + Ro02_G02317 424 LPYPKDSEKVMLARQTGLTRNQVANWFINARVR 456 69*****************************88 PP | |||||||
2 | Homeobox | 28.1 | 3.5e-09 | 961 | 998 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gL+++qV++WF N R + Ro02_G02317 961 FEHflHPYPNDSEKLMLASQTGLSKNQVSNWFINARVR 998 554459******************************88 PP | |||||||
3 | BELL | 114.4 | 5.8e-37 | 282 | 353 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erq+lq+kk+kLls+l+eVd+rYkqy++q+q v+s F+ +ag g+a pYt+lAl+aiSrhFr+L dai++q+ Ro02_G02317 282 ERQDLQNKKTKLLSMLDEVDRRYKQYYHQMQNVVSFFDKAAGNGAAGPYTALALQAISRHFRSLHDAIKGQV 353 799******************************************************************997 PP | |||||||
4 | BELL | 100.5 | 1.3e-32 | 823 | 893 | 2 | 72 |
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 ++e q+k+a L++lleeV++r ++y++q++ v+ssFe+v+g g+ak+Yt+lAlka+SrhF +L+dai+++i Ro02_G02317 823 KHEFQAKIANLITLLEEVEDRCEKYYHQMEEVMSSFEMVVGAGAAKSYTALALKAMSRHFGSLRDAIVSHI 893 789*****************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1038 aa Download sequence |
MIRRLGGTQT MATYFQNLSN QNLLTPYPGD EKLASYPEQP SNMMMYLNQA SYPGSYSEVL 60 SGGSFSPHKC AESDGGRNEM MFIPPTSGPV RDGVTGDSLI GSLDGKHGIQ DHGLSLSLAT 120 QIPSAVSVPS FEYQYLNPSL PSVLSTSQIL GKGEFHCKGD EYSQNEEFRN FESLTSGLYD 180 SLKTQNFSSP MGSMVPKEMH SEAYLYDSLG FSNSMLNTKY LKAAQQLLDE VVNVRKALKQ 240 SRSNKHQRPN GSDGSKETDG IRMSSDPSES SNISSVELSP AERQDLQNKK TKLLSMLDEV 300 DRRYKQYYHQ MQNVVSFFDK AAGNGAAGPY TALALQAISR HFRSLHDAIK GQVQVAQRSL 360 GEKDTPSDAQ GEVIPRLRYV DQQLRQQRAF QQHGIMQHSW RPQRGLPESS VAILRAWLFE 420 HFLLPYPKDS EKVMLARQTG LTRNQVANWF INARVRLWKP MIEEMYKEEF GDLEMDSKSS 480 PENVLKEARV DFSASEDRRD ELQESLMSAT ADSVEPGQVH DSKSGITKLQ DDGQRPNADD 540 RSLYLDANQN GVATYDMSGL GNAVGSEVSL ALELRHSEEH DGFPAPNGSE VRVNDPEASL 600 DCYYGDPGQQ QYSLQILVTM VSQDSPPNPA SSILHQFIVS NSMAGQNHME NQHQLDAAYG 660 SNFRTSTHTF PQSLPSIHSL EERISRSMDL VHAPQTEESD HVSHTRHLMD HHQAQRLSLS 720 LGSHMLLPSN SHSVQYVSDD YSFMGNALAS SSNSLAAIIG NSRYLKPAQS LLEEIVSVGG 780 KSVDISNEKH VGKLYGGGRR GSMGLSSELK AELCCNGLIS PDKHEFQAKI ANLITLLEEV 840 EDRCEKYYHQ MEEVMSSFEM VVGAGAAKSY TALALKAMSR HFGSLRDAIV SHIYAEKRKL 900 MQDVPKVSSG LAQLSLFDRE CRQKRMSLQQ LGILHSQRQA AWRPIRGLPE TSVAILRTWL 960 FEHFLHPYPN DSEKLMLASQ TGLSKNQVSN WFINARVRLW KPMIEEMYKE EFGDSSQDSN 1020 PLANSSMTGE SNTDHTED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75410.2 | 1e-105 | TALE family protein |