PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro02_G00582
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family NAC
Protein Properties Length: 1587aa    MW: 176124 Da    PI: 7.1684
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro02_G00582genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM66.48.4e-2195310822128
          NAM    2 ppGfrFhPtdeelvveyLkkkvegkklel.eevikev.diykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89  
                   ppGfrF P++ +l+++yL +k ++  ++   ++i+e+ d+ + +P +Lp        +k+++++wy ++ +  +      ++++tksgyWk + + 
  Ro02_G00582  953 PPGFRFYPSEAQLLSYYLPNKKANPAIPGgYNMIRELhDLPERDPFELPDtlcysyGYKGRKRHWYCYTAAVVS------EEKKTKSGYWKRKARV 1042
                   9********************999997772456***99**********95477765445566688888776554......456789********** PP

          NAM   90 kevlskkgelvglkktLvfykgrapkge.ktdWvmheyrl 128 
                   ++v+s++g + g++++++f  g++p++   tdWv+ +y+l
  Ro02_G00582 1043 RDVVSREGVVLGTRTSFAFCVGDSPNTAlATDWVLYQYAL 1082
                   ********************9988776549********87 PP

2NAM81.12.4e-25130514331127
          NAM    1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.k.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89  
                   lppG+rF P++e+l+++yL +k +++      + ike+d+y+++P +Lp        + +++++wy ++ r  k       +r +ksgyWk +g+ 
  Ro02_G00582 1305 LPPGCRFYPSEEQLLCYYLSNKNAEHAkSGGYDLIKELDLYDHDPFSLPdYacysyGHGGRKRHWYCYTVRVLK-------ERRAKSGYWKRKGRA 1393
                   79********************888773445678***************5366543223355688888887664.......344689********* PP

          NAM   90 kevlsk.kgelvglkktLvfykgrapk.gektdWvmheyr 127 
                   ++v+ + ++++ g + ++ fy g++pk +++tdWv+ +y+
  Ro02_G00582 1394 RDVVGRgGKAVLGRRSSFEFYLGNSPKtAVRTDWVLYQYA 1433
                   *****9566679*********997766167*********6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1587 aa     Download sequence    
MAQIQVQHQA PVTGPNGVPS GQQQMVSTSL YVGDLDQNVT DSQLYDLFNQ VGQVVSVRVC  60
RDLSTRRSLG YGYVNYSNPQ DAARALEVLN FTPLNSKSIR ICYSLRDPTI RKSGTGNIFI  120
KDPDDAAKAV ELLNGKQFDD KEWYVGKAQK KNEREVELKE KFEHSMKEAS DKFQGVNLYI  180
KNLDDSIGDE KLKEIFSEYG TVTSCKVMRD PEGVSRGSGF VAFSTSEEAS RALLDMNGKM  240
VVSKPLYVAL AQRKEERRAR LQAQFSQMRP VAMAPSVAPR LPMYPPGAPG LGQQFLYGQG  300
PPAIIPQQAG FGYQQQLVPG LRPGGAPMPN FFVPMVQQGQ QGQRPGGRRG AGPVQQNQQQ  360
VPLMPQHMIP RGRMYRYPPG RNMPEVPFSG GMLSVPYDMG GMPMRDPAGG RAMPVPALAS  420
SLANATPEEQ RTMLGEALYP QVDALEPDSA AKVTGMLLEM DQTEVLHLLE SPEALKAKVA  480
EAIEVLRNVT QHQANNSADQ LASLSLSDKL PFYLAPADLA MLSVHYIQKG LFFTKPPEAA  540
NNPDFMDSLL EKLKHSLALA LVHFYPLAGR FVTKQEQDPP LYLVYVDCTN SPGAKFIHAS  600
LDMSISEILS PIDVPLVVQS LFDHDRAVNH DGHTTSLLTI QVTELVDGVF IGLSINHCLV  660
DGTSYWHFFN TWSEIFRAQE KKFPVSEISS PPVLDRWFPE GHGPIISLPF KGPEEFIDRF  720
EAPVLRERMF HFSSESIAKL KSKANSECKS SKISSFQALS ALMWRTITRA RGLPPDQETS  780
CRLAANNRGR IDPPLSPNYF GNSIFPIRSE GVKAGELFEH GLGWAAWKLH EAVVNHNDKV  840
IKGLRDAWMQ SPSVYSLRYF DPHSVMMGSG PRFDMYGNEF GMGKAVALRS GYANKFSGKV  900
SSFQGRQSGS IDLEVCLPPE AMTALESDHE FMEVASGRPM LSIMADSRAA AFPPGFRFYP  960
SEAQLLSYYL PNKKANPAIP GGYNMIRELH DLPERDPFEL PDTLCYSYGY KGRKRHWYCY  1020
TAAVVSEEKK TKSGYWKRKA RVRDVVSREG VVLGTRTSFA FCVGDSPNTA LATDWVLYQY  1080
ALVNHVEGSF VLCRVFFRSD SGLNSCAENN DGVLMPDPVS ISSIQLDEQA QVRPGNAHPI  1140
PAFLPPSSLQ QLFNGQAPIV PAQAVPPPVE SFSAVLTTAL VNATPEQRRT MLGEKLYPLV  1200
EMWEKDRTAK VTGMLLEMDN TEILHLLESP EALRARVADA MHSITTLTEG FKGTLLLLLL  1260
LINPSESQIS SSLAQNRKSE NLRAKADDIP IHMGEGDTKP SSYYLPPGCR FYPSEEQLLC  1320
YYLSNKNAEH AKSGGYDLIK ELDLYDHDPF SLPDYACYSY GHGGRKRHWY CYTVRVLKER  1380
RAKSGYWKRK GRARDVVGRG GKAVLGRRSS FEFYLGNSPK TAVRTDWVLY QYAQLDHLQA  1440
SFVLCRVFVR SQGGTSISEN GLSSCAEVTV STVRHIGIQH DGFYAPHIVH EIHGDKSVPR  1500
NTDKSKDQMR LETEVDNQVM TGPLSISSIQ INEQVPSSVL GDSSPLLLDA LATEHLLSII  1560
EGDFIELALK EICSAPRRQG LTGLKNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.11e-21NAC family protein