PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro01_G29781 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | MYB_related | ||||||||
Protein Properties | Length: 148aa MW: 16994.2 Da PI: 10.3329 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.7 | 7.4e-10 | 12 | 60 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +WT+ E+e l+ +v ++G g Wk I + +R+ ++k++w+ Ro01_G29781 12 KWTAKEEEALLAGVVKHGVGKWKIILEDSEfgpflSHRSNRNLKDKWRR 60 8****************************999***9***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence |
MEGEGKSQRP PKWTAKEEEA LLAGVVKHGV GKWKIILEDS EFGPFLSHRS NRNLKDKWRR 60 LSRLGGTSTV RTCGNYKPWR RLSVRTWANY KPFRAAEALK EAQTISETNE AQTISETNEA 120 QRISKPADQD TESMLQLASQ IYERCSRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72740.2 | 4e-20 | MYB_related family protein |