PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro01_G26756 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | B3 | ||||||||
Protein Properties | Length: 235aa MW: 26507 Da PI: 4.8161 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 41.4 | 2.6e-13 | 32 | 114 | 7 | 90 |
.-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 7 psdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 + +++++l +p kf + h ++k+++ tl+le + + sW+v + r+ g+++l+ GW++Fv++n + + ++++++g+++f Ro01_G26756 32 RQPDHNTDMLKIPMKFRRMHlHKDKATQATLRLEELPNVSWKVDV--RRDAGEILLKLGWEKFVEDNMVGTITGLMLTYEGNMTF 114 455667788************77888999****************..**********************9988888888887776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MALSDVWIAF FGSSRMRDEA IQRTPTFVCT VRQPDHNTDM LKIPMKFRRM HLHKDKATQA 60 TLRLEELPNV SWKVDVRRDA GEILLKLGWE KFVEDNMVGT ITGLMLTYEG NMTFSVARFV 120 EDNELFVGGK FLLFHCDGGT TLRAESDGDD LNDDGDDRED NNQIVGTNEV ARFDLATWDV 180 PGHPNCTCMI RTYSAFMVQV CPAGTKHIGG KSFASAKEEE EKEEVPSRQS MMGGQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18000.1 | 1e-08 | B3 family protein |