PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro01_G24158 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | GeBP | ||||||||
Protein Properties | Length: 252aa MW: 29481.9 Da PI: 6.3352 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 33.6 | 1.1e-10 | 91 | 161 | 22 | 97 |
DUF573 22 fkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 f++++ + + ++fy+++k+++ + + q+ +K+++LKkK+ k++++ +++sf+++h++k+f lsk+ W+ Ro01_G24158 91 FREEKAENRKYKPKEFYSYIKDRLG-QGDSIQVQDKVKSLKKKYIKMQAR----NQMSFANSHEEKVFILSKIYWR 161 666777777778899********97.56789*******************....9********************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MEPKTSSLDD IEGRVVADSF EGSFSESDQD DNKYENENEA QSKYENENEA YSTPPGSTIT 60 DQKMMIIKKK IAIPNPASAA ADSKAANPKR FREEKAENRK YKPKEFYSYI KDRLGQGDSI 120 QVQDKVKSLK KKYIKMQARN QMSFANSHEE KVFILSKIYW RKNPKEKNDH DQKKNTKEKS 180 DQILLDGLRH YLERESIDSR WVNEEQLATL KNLWNNLQLS KVRYDLAISE FDVELNQRAL 240 EVYKEFGYEN DP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 1e-07 | GeBP family protein |