PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro01_G23557 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | G2-like | ||||||||
Protein Properties | Length: 275aa MW: 29896.2 Da PI: 6.6834 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 51.2 | 2.7e-16 | 51 | 81 | 1 | 31 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPkt 31 k+rlrWt++LH+rFv+a++qLGG+++AtPk Ro01_G23557 51 KQRLRWTSDLHDRFVDAITQLGGPDRATPKG 81 79***************************95 PP | |||||||
2 | Myb_DNA-binding | 27.3 | 8.5e-09 | 53 | 78 | 1 | 23 |
TSSS-HHHHHHHHHHHHHTTTT...- CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...t 23 r+rWT ++++++vda++qlGg+ t Ro01_G23557 53 RLRWTSDLHDRFVDAITQLGGPdraT 78 89*******************95555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MYHAKKFSTA TLVPHKPQTS EQLASVGVVS DSSVKNPTPS GSGSGSGGNG KQRLRWTSDL 60 HDRFVDAITQ LGGPDRATPK GKYRLAKYLP ESPADGSKDE KKGSADSLSC SDSSPGVQIN 120 EALRMQMEVQ KRLHEQLEVQ RQLQMRIEAQ GKYLQKIIEE QQKLGGVLKG SDALPSAEDK 180 QKPSQLDTPG DGSTRSSSPR KKHRMDDGLA SDCTTSDLPP KPDQKNEFVG QWDQDIYPNN 240 GGFGFDLQTE LKEGEGGGAT QKGPMELRPL CDSEQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 6e-51 | G2-like family protein |