PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro01_G23557
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family G2-like
Protein Properties Length: 275aa    MW: 29896.2 Da    PI: 6.6834
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro01_G23557genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like51.22.7e-165181131
      G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPkt 31
                 k+rlrWt++LH+rFv+a++qLGG+++AtPk 
  Ro01_G23557 51 KQRLRWTSDLHDRFVDAITQLGGPDRATPKG 81
                 79***************************95 PP

2Myb_DNA-binding27.38.5e-095378123
                     TSSS-HHHHHHHHHHHHHTTTT...- CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...t 23
                     r+rWT ++++++vda++qlGg+   t
      Ro01_G23557 53 RLRWTSDLHDRFVDAITQLGGPdraT 78
                     89*******************95555 PP

Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MYHAKKFSTA TLVPHKPQTS EQLASVGVVS DSSVKNPTPS GSGSGSGGNG KQRLRWTSDL  60
HDRFVDAITQ LGGPDRATPK GKYRLAKYLP ESPADGSKDE KKGSADSLSC SDSSPGVQIN  120
EALRMQMEVQ KRLHEQLEVQ RQLQMRIEAQ GKYLQKIIEE QQKLGGVLKG SDALPSAEDK  180
QKPSQLDTPG DGSTRSSSPR KKHRMDDGLA SDCTTSDLPP KPDQKNEFVG QWDQDIYPNN  240
GGFGFDLQTE LKEGEGGGAT QKGPMELRPL CDSEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.16e-51G2-like family protein