PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro01_G11672 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | WRKY | ||||||||
Protein Properties | Length: 223aa MW: 25066.5 Da PI: 6.0783 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.3 | 1.8e-29 | 127 | 185 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDgy+WrKYG+K+vk++++pr+YY+C+s gC vkk+ver+++d ++v++tYeg Hnh+ Ro01_G11672 127 MDDGYKWRKYGKKSVKNNTNPRNYYKCSSVGCDVKKRVERDRDDSSYVITTYEGVHNHD 185 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MDSSCLENPN PNPSLSNYAA FQFADQNQLD PSFMDFDELS DYLMLDYRVD DDHHLHQDSL 60 SLTVVSSEKP HTAAGSGATS RNGNNNMQVI CIYAPQYRDS AAMKNCKKEV GHGHRVAFRT 120 KSELEIMDDG YKWRKYGKKS VKNNTNPRNY YKCSSVGCDV KKRVERDRDD SSYVITTYEG 180 VHNHDTPNCA QLYFNSPAQL VDVDPNNSIW TTLPASSPSS ASS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64810.1 | 1e-34 | WRKY family protein |