PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro01_G08687 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | NF-YB | ||||||||
Protein Properties | Length: 230aa MW: 25392.3 Da PI: 7.6621 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 178.8 | 4.9e-56 | 38 | 133 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdrflPianvsrimkk lPanakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv plk yl+kyre+egek Ro01_G08687 38 KEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKGYLNKYRETEGEK 133 89********************************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MKYLMRMQMP FIMSGKRNQT SPVGSPLSCG NVSDGGSKEQ DRFLPIANVS RIMKKSLPAN 60 AKISKEAKET VQECVSEFIS FITGEASDKC QREKRKTING DDLLWAMTTL GFENYVGPLK 120 GYLNKYRETE GEKNSMARGP EDHNHSSHDD HHINNNNNQI HNGANEINTV GINKVDFFNN 180 GGFYSLGGQQ VMSATPKGFG ESGRVNIGYG ENLVTYGDGN ANHLHNGIGW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 2e-63 | NF-YB family protein |