PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro01_G05088 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | G2-like | ||||||||
Protein Properties | Length: 89aa MW: 10015.5 Da PI: 6.2308 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 52 | 1.6e-16 | 16 | 66 | 4 | 55 |
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++W LH +Fv av+ L ++A P+ +l+lm+v+ +++e+v+ HLQ+YR Ro01_G05088 16 MVWPMYLHIKFVAAVNVL-ALDNADPRDVLDLMDVDYVSVENVAIHLQRYRR 66 89****************.9*******************************5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 89 aa Download sequence |
MACNQNSSSQ TKQRPMVWPM YLHIKFVAAV NVLALDNADP RDVLDLMDVD YVSVENVAIH 60 LQRYRRSLER MASHEASILA ASLAATNLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-11 | ARR-B family protein |