PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro01_G00984
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family BES1
Protein Properties Length: 323aa    MW: 34921 Da    PI: 9.0245
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro01_G00984genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8222205.1e-6851541148
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 
                  g+sgr ptwkErEnnkrRERrRRaiaakiy+GLRaqG yklpk++DnneVlkALc+eAGwvve+DGttyrkg+kp+   e+ag+ +++s +ss+q s+
  Ro01_G00984   5 GSSGRLPTWKERENNKRRERRRRAIAAKIYSGLRAQGSYKLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGCKPP--IEIAGTPTNMSACSSMQPSP 100
                  689*************************************************************************..9******************* PP

       DUF822  99 kssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148
                  +ss+++spv+sy+asp+sssfpsp+++d ++++ +    + llp+l++l++++ 
  Ro01_G00984 101 QSSSFPSPVPSYHASPSSSSFPSPTRFDGNPSSYHqnpsSYLLPFLHNLASIPT 154
                  ****************************99987666788889999999887665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MTGGGSSGRL PTWKERENNK RRERRRRAIA AKIYSGLRAQ GSYKLPKHCD NNEVLKALCA  60
EAGWVVEEDG TTYRKGCKPP IEIAGTPTNM SACSSMQPSP QSSSFPSPVP SYHASPSSSS  120
FPSPTRFDGN PSSYHQNPSS YLLPFLHNLA SIPTNLPPLR ISNSAPVTPP LSSPTSRGSK  180
RKPDWESLTN GCINSLRHPL FAASAPSSPT RRHHLAPATI PECDESDAST VDSGRWVSFQ  240
TGAPSVAPLS PTFNLMKPVA EQNVLHNTVV GHGGIGWGST VERGRGSEFE FESGRLKAWE  300
GERIHEVGVE DLELTLGNGK MHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.21e-91BES1 family protein