PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_ssc0000451.1_g000023.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

SRS

Protein Properties

Length: 382aa MW: 42291.2 Da PI: 7.2135

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_ssc0000451.1_g000023.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	25.3	4.3e-08	49	131	5	86
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathv..kstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsa 85 + +C+ CGn a+ C +e C+ CC C+ hv t +p + + q +s+++++s ++++ + r+l s++ ++ Rmu_ssc0000451.1_g000023.1 49 KPKCKVCGNVARSRCPFESCKSCCSRAQNPCHIHVlkANTTIPDKAPASSSPQFDHQSTETSSSGNSHRVASLRQL-SNNFAQ 130 568********************999****953358888777666555554444444444444444444443.233333 PP DUF702 86 l 86 Rmu_ssc0000451.1_g000023.1 131 F 131 3 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MAAASSPSPA LSATTSDASH APSAAVPAPP FSAAFRSETP TKTLRGLNKP KCKVCGNVAR 60 SRCPFESCKS CCSRAQNPCH IHVLKANTTI PDKAPASSSP QFDHQSTETS SSGNSHRVAS 120 LRQLSNNFAQ FNNVHITLRT KKPLTRKDAV ATNEWRFAKL KEFKDRNIEV ENEAFDRYMQ 180 NISLLEEVFS VNSNAEESIG DGSSISNHDM TTTEGDNGDM VSGLKLKLRS NPMRTSNFRK 240 RIQQIVDQGL KKLKTCESAD GDKEPSDQIE LDMGPRKGEN WRAARASALG DLIDKLNKAR 300 NEEDLQSCME MKTQLFNELK SMSSSELEDT ETAKKQTTKN DLETRKELQY LFPHLISTNE 360 IDQETLSSVN THFSSLEQIE GL

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MAAASSPSPA LSATTSDASH APSAAVPAPP FSAAFRSETP TKTLRGLNKP KCKVCGNVAR  60
SRCPFESCKS CCSRAQNPCH IHVLKANTTI PDKAPASSSP QFDHQSTETS SSGNSHRVAS  120
LRQLSNNFAQ FNNVHITLRT KKPLTRKDAV ATNEWRFAKL KEFKDRNIEV ENEAFDRYMQ  180
NISLLEEVFS VNSNAEESIG DGSSISNHDM TTTEGDNGDM VSGLKLKLRS NPMRTSNFRK  240
RIQQIVDQGL KKLKTCESAD GDKEPSDQIE LDMGPRKGEN WRAARASALG DLIDKLNKAR  300
NEEDLQSCME MKTQLFNELK SMSSSELEDT ETAKKQTTKN DLETRKELQY LFPHLISTNE  360
IDQETLSSVN THFSSLEQIE GL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32730.1	2e-99	SRS family protein