PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_ssc0000400.1_g000103.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 137aa MW: 15999.3 Da PI: 10.2383 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 58.5 | 2.3e-18 | 22 | 107 | 2 | 88 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 +Yn+Y ++ GFs+r k +k +g +r fvCs eg+r ++k++ +++raetr gC+ak+k++ + + k+ v +++ Rmu_ssc0000400.1_g000103.1 22 CYNRYTYRFGFSTRLIKAHKY-SSGLLRDRLFVCSAEGTRGRDKRN-LYVKSHRAETRFGCRAKMKIRYDLlSRKFSVVEFVA 102 7*************9887776.6888*****************999.89999******************99*********** PP FAR1 84 eHnHe 88 +H+H Rmu_ssc0000400.1_g000103.1 103 DHTHV 107 ****5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
MRQELILVVG MEFETEDDAH ACYNRYTYRF GFSTRLIKAH KYSSGLLRDR LFVCSAEGTR 60 GRDKRNLYVK SHRAETRFGC RAKMKIRYDL LSRKFSVVEF VADHTHVTST PSKAHLFRSH 120 RKISLAQIVQ ADMAYDS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-17 | FAR1 family protein |