PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000393.1_g000021.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 490aa    MW: 53174.4 Da    PI: 7.8916
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000393.1_g000021.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.24.5e-30206265159
                                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                 ++Dg++WrKYGqK  kg+++pr+YYrCt a  Cpv+k+v+r+ +d +++++tYeg+Hnh+
  Rmu_ssc0000393.1_g000021.1 206 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApACPVRKQVQRCVDDMSILITTYEGTHNHP 265
                                 58***************************99****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    
MPNSNSTAAA EETKVESFGC QGGHSEEENY ELVNAKAEMN EVRKENARLK KTLEHMMKDY  60
QSLQLRFFDI LKQESHSKKA TMSASTSHIK IEEAHDQLLS LCLGRSPRDP KNISDESRLV  120
QVDHHQDLKA NLSLELGSKL QLPTELVLSG PIPENSSEEP KEAEASPSST KTPRTIGNED  180
DEASQQANAA KRARVSVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPACPV  240
RKQVQRCVDD MSILITTYEG THNHPLPMTA TSIASTTSAA ASMLLSGSST SQLPGLGSSF  300
GLFDNSRQQQ LYLSKFSSSP LLPTVTLDLT SSPSPSSTQY RTFRPSVSFC SSESNINLPT  360
SWGNGYPKFG TPFDRKNQEC FQPNHQPSSQ VSLTETLTKA ITSDPNFKSV IAVALSSMVG  420
GGAASYGSQG IGERLGQHLP QNAKGCASSI FNSLSSSDSQ KGNLTLLQPP LPFPESKSTS  480
SSPAIRDKSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.12e-54WRKY family protein