PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_ssc0000393.1_g000021.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 490aa MW: 53174.4 Da PI: 7.8916 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.2 | 4.5e-30 | 206 | 265 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a Cpv+k+v+r+ +d +++++tYeg+Hnh+ Rmu_ssc0000393.1_g000021.1 206 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApACPVRKQVQRCVDDMSILITTYEGTHNHP 265 58***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 490 aa Download sequence |
MPNSNSTAAA EETKVESFGC QGGHSEEENY ELVNAKAEMN EVRKENARLK KTLEHMMKDY 60 QSLQLRFFDI LKQESHSKKA TMSASTSHIK IEEAHDQLLS LCLGRSPRDP KNISDESRLV 120 QVDHHQDLKA NLSLELGSKL QLPTELVLSG PIPENSSEEP KEAEASPSST KTPRTIGNED 180 DEASQQANAA KRARVSVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPACPV 240 RKQVQRCVDD MSILITTYEG THNHPLPMTA TSIASTTSAA ASMLLSGSST SQLPGLGSSF 300 GLFDNSRQQQ LYLSKFSSSP LLPTVTLDLT SSPSPSSTQY RTFRPSVSFC SSESNINLPT 360 SWGNGYPKFG TPFDRKNQEC FQPNHQPSSQ VSLTETLTKA ITSDPNFKSV IAVALSSMVG 420 GGAASYGSQG IGERLGQHLP QNAKGCASSI FNSLSSSDSQ KGNLTLLQPP LPFPESKSTS 480 SSPAIRDKSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 2e-54 | WRKY family protein |