PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000366.1_g000027.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 316aa    MW: 35212.6 Da    PI: 7.4681
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000366.1_g000027.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.98.9e-33166222258
                                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
                        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                                 +Dgy+WrKYGqK vk+s+fprsY+rCtsa+C+vkk+ver+ +dp +v++tYeg+H+h
  Rmu_ssc0000366.1_g000027.1 166 EDGYRWRKYGQKAVKNSPFPRSYFRCTSASCNVKKRVERCVNDPGIVVTTYEGQHTH 222
                                 8******************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MEKKDHLIKM EGNTRSSSFS VTTADYSYPF PGMFDFSQGE QKDSLGFMEL LGIQDFCPAN  60
SLFDLPQITT PQVLPTTSID MAKEYSFNPS TPNSSSISSA SSEAVNEEPH TDKKAAADLQ  120
EEDDGHDQPE PKKGLKANQK RKKTTEKKLR EPRFAFMTKS EVDHLEDGYR WRKYGQKAVK  180
NSPFPRSYFR CTSASCNVKK RVERCVNDPG IVVTTYEGQH THLSPLMLPL PPPPPPTTAP  240
NSIIMPRTLF SQYQQQQGLR PFADNQGCNL GFSTPNGTNR SFLNERCFCS PAGGSALMTD  300
HGLLQDIVPS NMLKQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.13e-41WRKY family protein