PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_ssc0000291.1_g000011.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 246aa MW: 28119.7 Da PI: 9.8482 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 59 | 1.6e-18 | 56 | 142 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklel 83 ++Y++Y+k++GF vrk++s+k ++g+++ t C + gk ++++++ + +++++ +t+Ck +++ k+ dgkw++++ +l Rmu_ssc0000291.1_g000011.1 56 DYYRKYGKQLGFPVRKRTSRKG-DDGNTKYITISCGRAGKFKSKSSN---SLKPHPSVKTDCKTLIRLGKSLDGKWKINSTKL 134 69***************99998.8888**************999888...999****************************** PP FAR1 84 eHnHelap 91 eHnH l+p Rmu_ssc0000291.1_g000011.1 135 EHNHGLSP 142 *****986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MERLSNESEN IILTNDQGTV DDSPKSLENN QEIKVEEIMQ VPSVEMSFDS IDEAYDYYRK 60 YGKQLGFPVR KRTSRKGDDG NTKYITISCG RAGKFKSKSS NSLKPHPSVK TDCKTLIRLG 120 KSLDGKWKIN STKLEHNHGL SPRKSRYFST NSELSSSIKR RLELNDVARI GLNKSYNSIV 180 VEAQGYDNVS FLEKDAQNHI EKIRRLRLKE GDATAVNTYF LDMQDKIASF FYAIAINEKG 240 RLRNLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76320.1 | 4e-25 | FAR1 family protein |