PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000264.1_g000034.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 451aa    MW: 51016.4 Da    PI: 5.5598
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000264.1_g000034.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.6e-19203253256
                         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  Rmu_ssc0000264.1_g000034.1 203 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 253
                                 59******9.**********955...5**************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    
METSRDCDLD KGKERDFFLE SCQWKPVFDE ASMSHRPLKK IKSPEHSHQH QSSSAFPPEF  60
HIPSSPPRSS SDTSSITSCC PFSSRIVFPF AFDGSLPQQQ QPIQFPHQFQ TTGLQPIQFP  120
PTTNVVEQQQ QQQQNQQQMI SFTSQQQQMI SWRQQQQQQM LQYWSDALNL SPRGRMMMMN  180
RFGGANSSGG IRPAAMPVST SKLYRGVRQR HWGKWVAEIR LPRNRTRLWL GTFDTAEDAA  240
MAYDREAFKL RGENAKLNFP ELFLNKDKDN NNAAAVSTAP SSTETASVPT QQVSKPSRHR  300
GKPLLKDLDL QLQVPISDRE TIAPPPAPYS HPQEDDDTGE SDLANASQQS EVENHGEGGG  360
IISDAPTQEM AWGEMAEAWM NAIPQGWGPG SPVWDDLELD MTSNNLVLQS HDYHHFTANN  420
PNRHELPQQE DNSCSASSSY PMQPFFWKDQ D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.12e-46ERF family protein