PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_ssc0000211.1_g000015.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 791aa MW: 90429.2 Da PI: 6.4795 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 102 | 5.7e-32 | 85 | 176 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkle 82 fYn+YA++vGFs+r+s+s++s+r+g i++r+fvC keg+r+ ++k+ +++ +r+r++tr+gCka+l vk++++gkw+v+ ++ Rmu_ssc0000211.1_g000015.1 85 FYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRtkDREIKRPRTVTRVGCKASLSVKMQDSGKWVVSGFV 167 9***************************************998888545677889**************************** PP FAR1 83 leHnHelap 91 +eHnHel+p Rmu_ssc0000211.1_g000015.1 168 KEHNHELVP 176 *******86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 791 aa Download sequence |
MDNEMIEFDI GLGGREGDDD FVEIEHPVED EEMVDSPLLG SASGSVNGVG FGGGSGEIYL 60 PEGDLLDLEP YDGMEFESEE AAKAFYNSYA RRVGFSTRVS SSRRSRRDGA IIQRQFVCAK 120 EGFRNLNEKR TKDREIKRPR TVTRVGCKAS LSVKMQDSGK WVVSGFVKEH NHELVPPDQV 180 HCLRSHRQIS GPAKTLIDTL QAAGMGPRRI MSALIKEYGG ISKVGFTEVD CRNYMRNNRQ 240 RSLDGDIQML LDYLRQMQAD NQNFFYAVQG DEDQAMGNVI WADPKAKTNY NYFGDTVTFD 300 TTYRSNRYRL PFAPITGINH HGQPVLFGCA FLINESEASF VWLFKTWLMA MSGRPPLSIT 360 TDHDPVIQSA IMQVFPQTRH RFCKWHIFKK CQEKLSHVFL QHPSFEADFH KCVNLTESIE 420 EFESCWLSLV DRYDLRDHEW LQTVYSARRQ WVPVYLRDTF FAEMSITQRS DSMNSYFDGY 480 VNASTNLSQF FKLYEKALES RNEKEVKADF DTMNTSPVLK TPSPMEKQAS EFYTKKIFMR 540 FQEELVGTLT FTASKGDDDE VIISYQVAKF GEDHKAYYVK LNVLDMMASC SCQMFEFSGL 600 LCRHVLAVFR VTNVLTLPSH YILKRWTRNA KSSVMLEDRS SDVYTNYLES HTVRYNTLRH 660 EAFKFVDGAK SSETYDLALD ALKEAAKKVA HAIKNDGRNV MVNGHIRGNL AGGGSRANYT 720 IGDHDGSSGQ NLSEDDMDKK IRELTYELEC ANRKCEVYRA NLLSLLKDIE DHKLQLSIKV 780 ENIKISMKDG F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 0.0 | FAR1 family protein |