PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_ssc0000197.1_g000009.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 366aa MW: 41311.1 Da PI: 7.6996

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_ssc0000197.1_g000009.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.6	4.9e-12	75	113	2	40
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 + +k++rr+++NReAAr+sR+RKka++++Le+ +L + Rmu_ssc0000197.1_g000009.1 75 PTDKVQRRLAQNREAARKSRLRKKAYVQQLETSRLKLVQ 113 579****************************86555554 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MNSSSTQFVT SRRMSAYEPI HQMSMWGESF MSNGNLNASA SMIMDADTQL DNQSEDASQG 60 ILGPSSKYDQ EATKPTDKVQ RRLAQNREAA RKSRLRKKAY VQQLETSRLK LVQLEQELDR 120 ARQQGLYIGS GLDANPLGYS GTMNPGVAAF EMEYGNWVEE QNKQIFELRT ALQAQISDIE 180 LHLLVDRGMS HYFKLFSMKS KAAKVDVFYV MSGMWKTSAE RFFSWIGGFR PSELLKVLLP 240 QLYPLAEQQH LDVSSLRQSC QQAEDALSQG MDKLQLTLAQ TVAADPLGEG MGEGIYVPQM 300 AIAMEKLEAL VSFVNQADHL RKETLQQMSR ILTIRQAARG LLALGEYFQR LRALSSLWTT 360 RPRELT

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MNSSSTQFVT SRRMSAYEPI HQMSMWGESF MSNGNLNASA SMIMDADTQL DNQSEDASQG  60
ILGPSSKYDQ EATKPTDKVQ RRLAQNREAA RKSRLRKKAY VQQLETSRLK LVQLEQELDR  120
ARQQGLYIGS GLDANPLGYS GTMNPGVAAF EMEYGNWVEE QNKQIFELRT ALQAQISDIE  180
LHLLVDRGMS HYFKLFSMKS KAAKVDVFYV MSGMWKTSAE RFFSWIGGFR PSELLKVLLP  240
QLYPLAEQQH LDVSSLRQSC QQAEDALSQG MDKLQLTLAQ TVAADPLGEG MGEGIYVPQM  300
AIAMEKLEAL VSFVNQADHL RKETLQQMSR ILTIRQAARG LLALGEYFQR LRALSSLWTT  360
RPRELT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65210.2	0.0	bZIP family protein