PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_ssc0000186.1_g000028.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 240aa MW: 27680.7 Da PI: 8.5621 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 84.3 | 2e-26 | 75 | 163 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 fY++YA+++GF +r+ + ++s+r+g+i r++ C+keg+ + + k r++ra+tr gCka+++vk +k+gkw++tk+++e Rmu_ssc0000186.1_g000028.1 75 FYDDYARRLGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKFGPVRKPRASTREGCKAMIHVKYDKSGKWVITKFVKE 157 9**************************************99999998************************************ PP FAR1 85 HnHela 90 HnH+l+ Rmu_ssc0000186.1_g000028.1 158 HNHSLV 163 ***996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MTYEISDDLF GGPPMRFSEK FCGQRLLASR EQTSPLALLQ SMDSGTQEVV AYEGEAILEP 60 YEGMEFESED AAKIFYDDYA RRLGFVMRVM SCRRSERDGR ILARRLGCNK EGHCVSIRGK 120 FGPVRKPRAS TREGCKAMIH VKYDKSGKWV ITKFVKEHNH SLVVSPREAR QTMDEKDKKI 180 QELSAELRNK KRLCTTYQEQ LTAFMKIVEE YNDQLSLKVK NVVNNLKEFE SIDVELTQRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 1e-110 | FAR1 family protein |