PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000078.1_g000008.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 335aa    MW: 37137 Da    PI: 4.8079
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000078.1_g000008.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-19113163155
                         AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                 ++++GVr+++ +g+W+AeIrd +     r  r +lg+++taeeAa  +++a+ +l+g
  Rmu_ssc0000078.1_g000008.1 113 KKFRGVRQRP-WGKWAAEIRDpF-----RrVRLWLGTYDTAEEAAMVYDNAAIQLRG 163
                                 59********.**********66.....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MNPAVKYSQH RNLTKLVSNS EAEAVRPRIV RISVTDGDAT DSSSDDEPEA FFGRQRVKKY  60
VNEISIESCS REAEESAAAA VWKSRTSRTV RKKAAGKTVV PATHRTLKPA PGKKFRGVRQ  120
RPWGKWAAEI RDPFRRVRLW LGTYDTAEEA AMVYDNAAIQ LRGPHALTNF HSPPAVKSEG  180
EEREADIMSN VKPVVSYGYN SGEESHNTIC SPTSVLRCPS PSNEDDSSSP SPKQQPQQQL  240
EVREDSCVSE NFSELSDHTS FESFIPNDIF DFQTTIPDFL EESSVFKESF CDFGSFGDIF  300
ADSAVDFGFG SSATTTCDYF QDIGDLFASD PLVAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.11e-53ERF family protein