PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000018.1_g000006.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 714aa    MW: 79996.6 Da    PI: 6.2703
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000018.1_g000006.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY57.82.2e-18493552259
                                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                 +Dg++W KY q ++ g++ pr YY C+ +   gC++ k+v+rs+ d+++++itY+g+H+++
  Rmu_ssc0000018.1_g000006.1 493 SDGFRWVKYAQTDIPGAKSPRVYYVCAPQnvgGCMAIKEVQRSN-DKEILKITYRGRHTCT 552
                                 7**************************988999***********.**************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 714 aa     Download sequence    
MFPEISEDMG ALSELMLDGS AIKEIPSSIE RLRGLKSLSM KNCTSLVCLP DSICNLADLI  60
YLYLEGCSKL CNLPENLGNL KYLCELKVDD TGIKRLPACI LHLKLGRLKF HYCKQMEAPL  120
SSWPSSIEDR CTVVVHLDFS YCNLKVLSDA IAYFRSLKVL NLSRNNNLKS LPATMNQLGY  180
LERLQLEDCK RLRSIPELSS RISYINAHNC TALEAVSTPQ SPYDIGRCFI FSNCSQLIQR  240
DFFRDIVETH FPPQGNCSRP FYFSIPRTEI PEQFIHQGRG SSVTAQLPQN WFHSNKFLGF  300
AICGVTNQPQ GVDYWKLSAR CFFTFKGDHC EYRFSFSLFN IYFDGFYRDW LVSNHMLVGY  360
VPWSEFGING EEVNERHYTE AKFEIELLHC ETLEEDGVLF HPSIERCDPC IERCGVRFVF  420
ANNEDEEVAH QDFGEPMVQG DNSEIRSLEG CSAERSGSDI TSDTSDEEEQ YLKLSEVFEG  480
ANREPSMETE VPSDGFRWVK YAQTDIPGAK SPRVYYVCAP QNVGGCMAIK EVQRSNDKEI  540
LKITYRGRHT CTLASTSNGG RVDSSTSVAN GASSVHDQVV QSPSSPVANG HGGNVTRVAD  600
NPVNDNNMIM LRDASSQDME PTPSNVASVS SQPVISSPSL TQVNLQPQSC SQPIVIRSSP  660
NSRTIVCPNT GMLMKTKSVA HKAKPMPKPV TKTSTRARAQ QGPKQDSDKK MWKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.15e-15WRKY family protein