PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0041365.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 156aa    MW: 17400.1 Da    PI: 7.5161
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0041365.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.5e-201869256
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                               +y+GVr+++ +g++++eIrdps +g  +r +lg+f+taeeAa+a+++a+ +l+g+
  Rmu_sc0041365.1_g000001.1 18 RYRGVRRRP-WGKFASEIRDPSRQG--ARQWLGTFDTAEEAARAYDKAAFNLRGH 69
                               6********.**********96543..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MEDPRKGKEE KAGMEEVRYR GVRRRPWGKF ASEIRDPSRQ GARQWLGTFD TAEEAARAYD  60
KAAFNLRGHL AILNFPNEYY SRVMGSPPYP PRFQSSVSSS SSSSASAAAT ASRGAGGSFE  120
SGSSSSAGQG RQVFEFEYLD DKVLEDLLDW EEEKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.16e-38ERF family protein