PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0040630.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 104aa    MW: 11491.1 Da    PI: 8.0994
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0040630.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP83.26.3e-262184265
                        TCP  2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt 65
                               + +kd hsk++T++g+Rd  v l a++ ++f+d+qd+LG+d++s +++WL+++a pai+el++ 
  Rmu_sc0040630.1_g000001.1 21 TCRKDHHSKVCTAKGPRDHLVLLAAHTTIQFYDVQDRLGYDRPSMAVDWLIKKAMPAIDELPSW 84
                               579**********************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
TASSCTSSEI VEARGHILRV TCRKDHHSKV CTAKGPRDHL VLLAAHTTIQ FYDVQDRLGY  60
DRPSMAVDWL IKKAMPAIDE LPSWNPNSIF VQTTSSPTMP ISAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.28e-37TCP family protein