PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0040156.1_g000006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB_related | ||||||||
Protein Properties | Length: 68aa MW: 7932.96 Da PI: 7.5392 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.8 | 3.9e-11 | 31 | 67 | 1 | 39 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 r +WT+eE++++++a +++ + Wk+I +g +t q Rmu_sc0040156.1_g000006.1 31 RESWTEEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQ 67 789*****************77.*********.999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 68 aa Download sequence |
MINPSSFNPQ PMSSDASGKK VRKPYTITKS RESWTEEEHD KFLEALQLFD RDWKKIEDFV 60 GSKTVIQV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G09600.1 | 1e-33 | MYB_related family protein |