PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0039772.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 94aa MW: 10596.9 Da PI: 5.1101 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 25.5 | 4.3e-08 | 56 | 93 | 1 | 37 |
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCsk 37 +fYn+YAk +GF vr ++++ s + +g++t+ ++vCs Rmu_sc0039772.1_g000001.1 56 SFYNAYAKAMGFYVRSDYKRLSiRITGRVTSLRLVCSA 93 5******************999999***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 94 aa Download sequence |
MDGSYEPSIS DIGLVSQSSV NGSDCNEMQY KGIRYDKLST EDLKGQEFKI VEEAESFYNA 60 YAKAMGFYVR SDYKRLSIRI TGRVTSLRLV CSAQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 8e-08 | FAR1 family protein |