PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0038320.1_g000002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 597aa MW: 68176 Da PI: 4.3425 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.3 | 3.9e-18 | 68 | 127 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpse..ng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+Wv+eIr+p+ g ++ r +lg+f+ta eAa a+++a+k+++g Rmu_sc0038320.1_g000002.1 68 CSYRGVRQRI-WGKWVSEIRVPNAntHGltsRKvGRLWLGTFDTAVEAAHAYDKAAKAMYG 127 67*****998.**********8664555986558************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 597 aa Download sequence |
MTPKSSDGDR KMGKRPRVDE TVVKWEKYSK NFDFAKDGLV NRMPRRMPTV GARKGRMRGK 60 GGPENLNCSY RGVRQRIWGK WVSEIRVPNA NTHGLTSRKV GRLWLGTFDT AVEAAHAYDK 120 AAKAMYGPVA RLNFPESLET SMSDETTESC DNASEFEDGV GEEPKQEDEV FDATVKEPRN 180 EWHREANSIK CQLQMEDELV NNDVEVEELA INNVRESVDE WHSEPKYVKC ELQTEDEFVE 240 DDVEVEALAM NNVREPEDVW PREPKYVKCE LEKEDHLVTN DVEVEAVTAN NVREYEDVWQ 300 WEPKYVKCDL EAQDELLQSK AEVERLAMNN VREEECQAVS YVGSSNRRHD NHLDNYLQVG 360 KFDSVPSGTP YTNLDFSDIF LRYSNDYLDA ELVDVKCNPK NDCNPSNDVT VDTSVMSKPM 420 EKEFALILES GDNNLHNEPI NVASNNLVTN LGEYEKTVLP PNEFQGDIAE TMKPNGHNGF 480 GDNNACLQEH DERINVAYSP RSGIKPSTDI ETQKEIDSKL GDLHSWSLDK TYGIELHNLP 540 NQLQIADGLY GSFNYKEEEC LGVDFNLDWS RQNYFSGEFE ESALPDSWFP YYHGGSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05410.2 | 3e-23 | ERF family protein |