PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0037294.1_g000005.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 414aa    MW: 45469.3 Da    PI: 6.3201
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0037294.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.71e-111156755
                        AP2  7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               r++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  Rmu_sc0037294.1_g000005.1 11 RRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 56
                               899*********988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    
MTRQEYVASL RRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGLNAV  60
TNFDMSRYDV KSILESSALP ITTGATAKRL KDVQQQQPPP PADHHHQIML SSVLDHHGQV  120
IRSSSSTEHD IMSNVYSAYG SYGAQQGCSW PTLAFNQAQA QAAAAPHQAP FAAGINGMQL  180
HYSPYGYGYG NAHAQRVWCK QEQDTNSNQE RSFHHQDDDH LRQQLQLGGT HNFFHDHDQQ  240
QQQQTSGLMG LMDSSAASME HSSGSNSVIY SGGDHHGNNN GYGSSTTGTG GGYIMPMVMS  300
TVVANDDQNQ ADGNNNNING FGDGDDQEAN IKAQQLGYDH HPQNMFLGSS STIDPAYQHH  360
ASNRNLYYHL PVQDDQHESS SVAVATSSTT CNMNWVPTAV PTLAHPTFTV WNDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17430.12e-40AP2 family protein