PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0030932.1_g000007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB | ||||||||
Protein Properties | Length: 274aa MW: 30855.5 Da PI: 6.2627 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.7 | 1.5e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++ Ed+ l+++vk++G+g+W + ar+ g++R++k++++rw++yl Rmu_sc0030932.1_g000007.1 14 KGMWSAREDQVLKNYVKKHGPGNWGKTARETGLKRCGKSVRLRWLNYL 61 688*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 44.7 | 3.1e-14 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T++E++l+++ +k+ G++ W++Ia +++ Rt++++k++w++ Rmu_sc0030932.1_g000007.1 67 KGNITEDEEDLIIRMHKLVGNR-WSLIAGRIP-DRTDNEIKNYWNST 111 6899******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MGRNSGFEKE GLKKGMWSAR EDQVLKNYVK KHGPGNWGKT ARETGLKRCG KSVRLRWLNY 60 LRPGIKKGNI TEDEEDLIIR MHKLVGNRWS LIAGRIPDRT DNEIKNYWNS TLRKKLAEEK 120 ETESEVSRNE MIKENLPSPV EDYGHQHLTK CDVVLGGGGG LMCFASNVNA EEDHQRRCLG 180 GTSTDTTILS PRVGVGVGTG GGANNNIEPT GDDLNYNAMT WNDSIMDVNG GQLYMSEFLQ 240 TDFSKFWEET DRFMNFEVGG CSTFNHELPN NWDG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 1e-53 | MYB family protein |