PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0030540.1_g000003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 141aa MW: 15550.3 Da PI: 10.2654 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 76.6 | 7.3e-24 | 55 | 128 | 2 | 75 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasecea 75 + +kdrhsk++T++g+Rd v + ++a++f+++qd+ G+d++sk+ +W +++ak+ai+el+ +s+s s ++ Rmu_sc0030540.1_g000003.1 55 TDRKDRHSKVYTAKGPRDHLVQITTHTAIQFYEVQDRVGYDRPSKAFNWIIKKAKAAIDELPPWNSNSISVQTT 128 679***********************************************************994444422222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence |
MEYAGRTMGE SHNNLHHRAM TSSSAASRLG LGIRTSSSSI ASEIVEARGH ILRATDRKDR 60 HSKVYTAKGP RDHLVQITTH TAIQFYEVQD RVGYDRPSKA FNWIIKKAKA AIDELPPWNS 120 NSISVQTTSS STVPISASQD T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 2e-32 | TCP family protein |