PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0025564.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 441aa MW: 51797.6 Da PI: 8.3621

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0025564.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	34.1	8.7e-11	2	58	30	90
FAR1 30 krtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 ++++vC+k+g+++ + +k r+r ++gCka++ ++k g++ ++ +++ HnH+l+ Rmu_sc0025564.1_g000001.1 2 RKEYVCYKQGTSKVQGEK-----RKRGLPKVGCKARIAAVRRKeYGRYAISVFVEGHNHPLT 58 789******9998877.....999*******8655555**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MRKEYVCYKQ GTSKVQGEKR KRGLPKVGCK ARIAAVRRKE YGRYAISVFV EGHNHPLTSP 60 PRVHLLRSHR RVSRVNTVLS QQLSLVNVQK HKQFEFFGVQ AGGIQNIGCT ERDLYNYGRT 120 CREEKKGHDG DLLYMHFQNE KEKDSSFVYT MESDEETRVT ICFWADSISR RAYSFYGDVV 180 IFDTTYNTNR YGMIFAPFTG VNNHGQTIIF ACAFLNDETT DSFVWLFKEF LNAMPGNAPE 240 NAPKMIITDQ DPAMTKAISE ALPQTFHRYC SWHILNKFSE KLDAIKYRDY YQDFHSCIWN 300 SSSREEFDSR WIEITEKSRL SDNKWLESIY EIRSSWIPAH VNHVFSAGMS SSQRAEGQHS 360 FFKNYVSAQN SLVEFMVQFK RALLHQRHYE LEEDHMNIDE KPKTVMSLDI EDHMAKVYTR 420 KLFYEVQEQL KESFKYKLEL L

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MRKEYVCYKQ GTSKVQGEKR KRGLPKVGCK ARIAAVRRKE YGRYAISVFV EGHNHPLTSP  60
PRVHLLRSHR RVSRVNTVLS QQLSLVNVQK HKQFEFFGVQ AGGIQNIGCT ERDLYNYGRT  120
CREEKKGHDG DLLYMHFQNE KEKDSSFVYT MESDEETRVT ICFWADSISR RAYSFYGDVV  180
IFDTTYNTNR YGMIFAPFTG VNNHGQTIIF ACAFLNDETT DSFVWLFKEF LNAMPGNAPE  240
NAPKMIITDQ DPAMTKAISE ALPQTFHRYC SWHILNKFSE KLDAIKYRDY YQDFHSCIWN  300
SSSREEFDSR WIEITEKSRL SDNKWLESIY EIRSSWIPAH VNHVFSAGMS SSQRAEGQHS  360
FFKNYVSAQN SLVEFMVQFK RALLHQRHYE LEEDHMNIDE KPKTVMSLDI EDHMAKVYTR  420
KLFYEVQEQL KESFKYKLEL L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-94	FAR1 family protein