PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0024939.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 246aa MW: 28278.3 Da PI: 8.8735 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 61.6 | 2.3e-19 | 12 | 102 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 fY +YAk +GF+ rk+ +++s r+g++t ++vCs eg+r e+ + +++ r +++ tr++C + +kv+ k ++ ++v ++++ Rmu_sc0024939.1_g000001.1 12 FYYAYAKAMGFDFRKDDKRTSARTGRVTICKWVCSAEGERLEKYMDnNNNVRMPKKLTRCHCPCLFKVRYFKeKNSYVVVDFKT 95 9***************************************99988745666779***************999899********* PP FAR1 84 eHnHela 90 +H+H+la Rmu_sc0024939.1_g000001.1 96 DHSHDLA 102 *****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MKFVTVEAAE TFYYAYAKAM GFDFRKDDKR TSARTGRVTI CKWVCSAEGE RLEKYMDNNN 60 NVRMPKKLTR CHCPCLFKVR YFKEKNSYVV VDFKTDHSHD LAQPQESHFL RSHRSVPDSH 120 LALATSMRRV SIKTCHAYQY MADISGGFAN VGFKMKDLYN KLDSSQREIV LEGDAKATLA 180 YLEGKAAEDK KLFCKYSTDE SNRLANLVWR DSTSLLDYCC FGDVLVFDST YKTNHYGKPL 240 VLFVGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 3e-33 | FAR1 family protein |