PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0024464.1_g000003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 152aa MW: 17739.9 Da PI: 8.097 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 84.1 | 2.8e-26 | 2 | 131 | 9 | 128 |
NAM 9 PtdeelvveyLkkkvegkkleleevikevd...iykvePwdLpkkvkaeekewyfFskrdkkyatgk.rknratk.....sgyW 83 Ptdeelv++yL +k+ ++ ++++++i+e++ y+ +P++L +++ +e++w+fF+++d+ + +++ +++r ++ g+W Rmu_sc0024464.1_g000003.1 2 PTDEELVTHYLMNKACSRAVPVADAIQEINatrFYSNHPKSLV-TFSDGERDWFFFIHEDNDSCSSHaQRKRNVRevgngLGFW 84 *******************999888887753338999*****6.7788999******99988764331333332223344789* PP NAM 84 katgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 k g+++++++++g++ +k L++++g +++k+++t+W m ey+l Rmu_sc0024464.1_g000003.1 85 KPNGSENPIYNEDGNVFATKIYLTYFSGscHSNKPKRTHWKMVEYHL 131 **************************8755889999**********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 152 aa Download sequence |
MPTDEELVTH YLMNKACSRA VPVADAIQEI NATRFYSNHP KSLVTFSDGE RDWFFFIHED 60 NDSCSSHAQR KRNVREVGNG LGFWKPNGSE NPIYNEDGNV FATKIYLTYF SGSCHSNKPK 120 RTHWKMVEYH LQIRREWVVL GRLQRGMDYT GF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15510.1 | 2e-14 | NAC family protein |