PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0023961.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 83aa MW: 9318.61 Da PI: 9.9349 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 86.4 | 6.6e-27 | 20 | 82 | 1 | 63 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikelt 63 a+g+kdrhsk++T++g++d vRl a +a +f+d+qd+L +d++s +++WL+++ak+ai+el+ Rmu_sc0023961.1_g000001.1 20 ATGRKDRHSKVCTSKGPKDHPVRLAAYTANQFYDVQDRLEYDRPSMAVDWLIKKAKAAIDELP 82 589**********************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 83 aa Download sequence |
IASSSTAREI VEARGHILRA TGRKDRHSKV CTSKGPKDHP VRLAAYTANQ FYDVQDRLEY 60 DRPSMAVDWL IKKAKAAIDE LPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31070.1 | 4e-35 | TCP family protein |