PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0022743.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 271aa    MW: 31210.1 Da    PI: 4.58
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0022743.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM29.81.7e-0941282128
                        NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra......t 78 
                                 pG rF P ++elv +yLk+ ++g+k++  ++ + ++d+y+ +  +L       +k++yfF++  ++ +  + +++a       
  Rmu_sc0022743.1_g000003.1   4 FPGERFCPMEDELVLFYLKPMLNGEKVPGRNFvVFDCDLYEDQNLRL-------NKDLYFFTRPTQEDEFHRLTSQAyaekleL 80 
                                599***********************999665466777776655555.......3789****9998877444444432222222 PP

                        NAM  79 ksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                + g+  +t + k+v+s  +g +vglkk   + + +  +  + +W++ e+ l
  Rmu_sc0022743.1_g000003.1  81 APGM-ATTRSGKPVKSLeTGLVVGLKKRYSYKNVTFVH--HGSWILYEFYL 128
                                2333.444555555554477789*****9998655555..899***99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MMTFPGERFC PMEDELVLFY LKPMLNGEKV PGRNFVVFDC DLYEDQNLRL NKDLYFFTRP  60
TQEDEFHRLT SQAYAEKLEL APGMATTRSG KPVKSLETGL VVGLKKRYSY KNVTFVHHGS  120
WILYEFYLDR SLREKRRKTV LCLLRKNVEP KSESQKKRKQ REEEEVLGNN YVCDDGESSN  180
REQEELPEPQ AKRQQSLPYF YNAPVPSEND AFAAELEELL PCFGEDNLPS EAEAIGFQGQ  240
ENVGPSFGND HGILNPLPEE DFLLEEVGTS A
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150159PKSESQKKRK