PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0022454.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 261aa MW: 28317.8 Da PI: 4.9427 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.2 | 4.2e-18 | 85 | 134 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr ++ +g+Wv+eIr+p++ + r++lg++ tae+Aa+a++ a+++++g Rmu_sc0022454.1_g000001.1 85 TFRGVRMRS-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAARAIKG 134 59****998.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MAKKINIESD AQANLHTSSS SSSSSSSTLT THDSLIDKST ENDQNSDKVS SSKGQELNNG 60 SNEPNTKKRQ RSSSTEHGDG GRHPTFRGVR MRSWGKWVSE IREPRKKSRI WLGTYPTAEM 120 AARAHDVAAR AIKGASAYLN FPELAQTLPQ PASASPKDIQ AAAAKAASAF EEVKKCEAET 180 EEEEEEEATL PSKDEQTTTT ANTSISTACS SSSTSNDYDD KLFDLPDLFM DGTNGSDQFC 240 FSSSSSFFYV EMTILALKGQ T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 7e-31 | ERF family protein |