PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0021954.1_g000001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 263aa    MW: 29472.4 Da    PI: 4.9584
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0021954.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.3e-18121171255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                 y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g
  Rmu_sc0021954.1_g000001.1 121 SYRGVRRRP-WGKFAAEIRDSTR---HgVRVWLGTFDSAEAAALAYDQAAFAMRG 171
                                69*******.**********422...25*************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MGYWDNNHIM SSHSITNTFQ TENSNISDFQ MNYSIFHSPN SDTSSEFSWD ALEFGNTSLP  60
FNENDSEEML LFGMLSKATQ ETTSFETHNS AASSNPIKEE EVSSDSTSEE ENPKTPKKEK  120
SYRGVRRRPW GKFAAEIRDS TRHGVRVWLG TFDSAEAAAL AYDQAAFAMR GSAAVLNFPV  180
ERVRESLRDM NCATSDLDGG CSPVVALKRK HSMRRKLGNK KSRMERDVRL ENVVVFEDLG  240
ADYLEQLLSS SESTSTTTAA ANW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-61ERF family protein