PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0021298.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

GeBP

Protein Properties

Length: 418aa MW: 45303.1 Da PI: 4.4966

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0021298.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	119.4	1.9e-37	128	226	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfsk 82 lfqrlw++eDei lLqG++d+++++g s ++d+ fy+++k++++++++k+qlveK+rrLKkK+++ +k++sgke+sf++ Rmu_sc0021298.1_g000001.1 128 LFQRLWTDEDEIELLQGFLDYTTQRGNkggSHQNDTALFYDQIKSKLQLEFNKNQLVEKLRRLKKKYRNVLNKIASGKEVSFKS 211 79*********************998845555********************************************** PP DUF573 83 ehdqkifelskkiWg 97 +hdq +fe+s+kiW Rmu_sc0021298.1_g000001.1 212 PHDQATFEISRKIWS 226 ************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MAPDQDDAVL PEGDLSSSSQ DDEEEDVDVD EDEDDDVDDD DDVINSASPS STSNSLPVAI 60 ATAAPTVTVA LPAPHATTAP ATTTTTAVIS EGLDPKRPRT IQYDPVLLPL AAPEEKKPAA 120 ALDDSRRLFQ RLWTDEDEIE LLQGFLDYTT QRGNKGGSHQ NDTALFYDQI KSKLQLEFNK 180 NQLVEKLRRL KKKYRNVLNK IASGKEVSFK SPHDQATFEI SRKIWSNIGR IGVAGADDND 240 DEDPNPNPNN PNFNHFEIKT EEAAGFQKST PKSRKRQRTP AQPKTPSFVE PAVPVIKENH 300 HNVNNGGGVG GGGGGGSNCG NCNVQGMIEE TVKSCLSPVL RELMSSSMGG GGPSRGFGGL 360 SLNPIPLSFG GPSMSLNFGG GEAADEQWRK QQILELEVYS KRLELVQNQI KVALDELR

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MAPDQDDAVL PEGDLSSSSQ DDEEEDVDVD EDEDDDVDDD DDVINSASPS STSNSLPVAI  60
ATAAPTVTVA LPAPHATTAP ATTTTTAVIS EGLDPKRPRT IQYDPVLLPL AAPEEKKPAA  120
ALDDSRRLFQ RLWTDEDEIE LLQGFLDYTT QRGNKGGSHQ NDTALFYDQI KSKLQLEFNK  180
NQLVEKLRRL KKKYRNVLNK IASGKEVSFK SPHDQATFEI SRKIWSNIGR IGVAGADDND  240
DEDPNPNPNN PNFNHFEIKT EEAAGFQKST PKSRKRQRTP AQPKTPSFVE PAVPVIKENH  300
HNVNNGGGVG GGGGGGSNCG NCNVQGMIEE TVKSCLSPVL RELMSSSMGG GGPSRGFGGL  360
SLNPIPLSFG GPSMSLNFGG GEAADEQWRK QQILELEVYS KRLELVQNQI KVALDELR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	7e-76	GeBP family protein