PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0020948.1_g000005.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 344aa    MW: 38092.2 Da    PI: 4.9254
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0020948.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.37.4e-29123184159
                                ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                ldDgy+WrKYGqK++ g+++pr+YYrCt++   gC ++k+v++s+ dp+++ +tY+geH+++
  Rmu_sc0020948.1_g000005.1 123 LDDGYSWRKYGQKDILGANYPRGYYRCTHRntqGCLATKQVQKSDADPTIFMVTYTGEHTCH 184
                                59***************************98889**************************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MMGNWEQKIL KSELTQGKEL AEKLMNHLHH SSSSQEGEFL ISKLLSSYEK VLSVLTRDVG  60
SEGESKQIQV LDSPCSFGNS SSPLSEISDH DCKNKNVFKK RKIMPKRTAE VKVCSGTGQD  120
GSLDDGYSWR KYGQKDILGA NYPRGYYRCT HRNTQGCLAT KQVQKSDADP TIFMVTYTGE  180
HTCHLVAQLN GKQNVSLKQE AGTPRQTPEK SFSFGLRVKT ENLDTRGEGK EIFPSYSFSP  240
TPIESENNVV EDLVFAATEN DFLGGSYAQT FGSPATFESD YFAAVSPCHF VLVGNDVQTS  300
DSDLTHEILS ASTSVANSPI GDFDFSLEDL DFYPFENNPE STFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.12e-51WRKY family protein