PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0020948.1_g000005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 344aa MW: 38092.2 Da PI: 4.9254 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.3 | 7.4e-29 | 123 | 184 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK++ g+++pr+YYrCt++ gC ++k+v++s+ dp+++ +tY+geH+++ Rmu_sc0020948.1_g000005.1 123 LDDGYSWRKYGQKDILGANYPRGYYRCTHRntqGCLATKQVQKSDADPTIFMVTYTGEHTCH 184 59***************************98889**************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence |
MMGNWEQKIL KSELTQGKEL AEKLMNHLHH SSSSQEGEFL ISKLLSSYEK VLSVLTRDVG 60 SEGESKQIQV LDSPCSFGNS SSPLSEISDH DCKNKNVFKK RKIMPKRTAE VKVCSGTGQD 120 GSLDDGYSWR KYGQKDILGA NYPRGYYRCT HRNTQGCLAT KQVQKSDADP TIFMVTYTGE 180 HTCHLVAQLN GKQNVSLKQE AGTPRQTPEK SFSFGLRVKT ENLDTRGEGK EIFPSYSFSP 240 TPIESENNVV EDLVFAATEN DFLGGSYAQT FGSPATFESD YFAAVSPCHF VLVGNDVQTS 300 DSDLTHEILS ASTSVANSPI GDFDFSLEDL DFYPFENNPE STFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46400.1 | 2e-51 | WRKY family protein |