PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0020815.1_g000006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 141aa MW: 16069.3 Da PI: 10.0841 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 75.7 | 9.4e-24 | 34 | 118 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklk.vkkekdgkwevtklele 84 fYn+YAke+GFs+r ++s ++k+n++ +++++vC+k+g+++ e +k r+r ++gCka++ v+k+++g++ ++ +++ Rmu_sc0020815.1_g000006.1 34 FYNRYAKEAGFSIRSHSSATNKDNTQLMRKEYVCYKQGTSKVEGEK-----RKRGLPKVGCKARIAaVRKKESGRYAISVFVEG 112 ***************************************9998877.....999***********7255666************ PP FAR1 85 HnHela 90 HnH+l+ Rmu_sc0020815.1_g000006.1 113 HNHPLT 118 ****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence |
MESEDDHVYI PQVKAELMPI LHQEFETIDD VVAFYNRYAK EAGFSIRSHS SATNKDNTQL 60 MRKEYVCYKQ GTSKVEGEKR KRGLPKVGCK ARIAAVRKKE SGRYAISVFV EGHNHPLTSP 120 PRVHLLRSHS RVSKVNTVLS Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-20 | FAR1 family protein |